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DNA Extraction from Cheek Cells
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ExtractionfromCheekCellsDNA

SamplePreparation

Cheekcellsareobtainedbyrinsingthemouthwith25mlsofanycommercialmouthwashsolutionavailableforabout30secthefirstthinginthemorning.Itisimportantnottobrushyourteethbeforecollectingthespecimen.Themouthwashisthendiscardedintoasterileconicaltubeandsenttothelaboratory.

ASaltingOutProcedureforDNAextractionfromCheekCells

  1. Tubecontainingmouthwashiscentrifugedat4000rpmfor15minutes.
  2. SupernatantisremovedcautiouslybymeansofasterilePipette,withoutdisturbingthepelletatthebottom.
  3. Pelletiswashedwith25mlTEbuffer,bymeansofcentrifigationat4000rpmfor10minutes.
  4. Repeatsteps2and3.
  5. ThepelletisresUSPendedin1mlSEbuffercontaining1μlproteinaseK(1mg/ml)and1%SDS.
  6. Incubateat370Covernightinawaterbath.
  7. Add1mlSEbuffer
  8. Add500μl6MNaCl
  9. Add2.5mlchloroform
  10. Mixfor60mininanover-the-toprotator.
  11. Vortexfor20sec.
  12. Centrifugefor10minutesat2000rpm,andsettheslowestbreakingforce
  13. Transferthesupernatanttoacleantube.
  14. Addanequalvolumeofisopropan-2-oltothesupernatanttoprecipitatetheDNA.
  15. IfDNAisvisIBLegotostep16andifnotgotostep17.
  16. IfDNAisvisible,spoolouttheDNAandplaceinmicrofugetubefilledwith1mlof75%ethanol(gotostep18)
  17. IfDNAisNOTvisiblecentrifugethetubefor4minutesat11,000ganddiscardtheisopropanol.Add1mlof75%ethanol.
  18. Centrifugefor4minutesat11,000ganddiscardtheethanoltakingcarenottolosetheDNA.
  19. Addethanolandrepeatcentrifugation2times.Discardethanolafterlastcentrifugation.
  20. Evaporateethanolbyplacingmicrofugetubeinoven(max60ºC)forabout20-30mins.
  21. Add100μlofTEbuffertorehydrateDNA,andmixovernightonanoverthetoprotator.

Fig.1.AmplificationofCTLA4genebyPCR.TracksmarkedCusingDNAextractedfromcheekcells,therestDNAextractedfromperipheralbloodleucocytes(WB).

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